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TF-rs1049296 C>T Variant Modifies the Association between Hepatic Iron Stores and Liver Fibrosis in Metabolic Dysfunction-associated Steatotic Liver Disease

  • Sui-Dan Chen1,
  • Ka-Te Huang1,
  • Huai Zhang2,
  • Yang-Yang Li1,
  • Yi Jin1,
  • Hai-Yang Yuan3,
  • Pei-Wu Zhu4,
  • Jian-Min Li1,
  • Christopher D. Byrne5,
  • Giovanni Targher6,7 and
  • Ming-Hua Zheng3,8,9,* 
 Author information 

Abstract

Background and Aims

Hepatic iron deposition (HID) in the reticuloendothelial system (RES) is associated with histological severity in metabolic dysfunction-associated steatotic liver disease (MASLD). This study aimed to assess the interaction between the transferrin (TF)-rs1049296 C>T variant and HID patterns on the risk of significant liver fibrosis in MASLD.

Methods

We analyzed 406 adults with liver biopsy-confirmed MASLD. HID was categorized as hepatocellular, RES, or mixed, based on Perl's iron staining. The association between iron-related genetic variants and significant liver fibrosis (fibrosis stage ≥ F2) was analyzed, focusing on the interactions between single-nucleotide polymorphism genotypes and iron deposition patterns. Multivariable logistic regression analysis was used to adjust for potential confounders.

Results

HID was detected in 271 (66.7%) patients, with hepatocellular, RES, and mixed patterns accounting for 11.1%, 18.0%, and 37.7%, respectively. A significant interaction was observed between HID and the TF-rs1049296 genotype (Pinteraction = 0.035). In multivariable analysis, male sex, hypertension, severe lobular inflammation, and mixed hepatocellular/RES iron deposition were independent predictors of significant liver fibrosis. RES deposition markedly increased the risk of significant liver fibrosis (adjusted odds ratio: 6.65; 95% confidence interval: 1.84–23.97, p < 0.05), particularly in men with isolated RES iron deposition (adjusted odds ratio: 5.26; 95% confidence interval: 1.21–22.81, p < 0.05).

Conclusions

The TF-rs1049296 T allele interacts with RES iron deposition to identify a MASLD subpopulation at elevated risk of progressive liver disease, providing opportunities for refined risk stratification and personalized management.

Graphical Abstract

Keywords

Metabolic dysfunction-associated steatotic liver disease, MASLD, Nonalcoholic fatty liver disease, Iron deposition, Single-nucleotide polymorphism, Fibrosis

Introduction

Metabolic dysfunction-associated steatotic liver disease (MASLD) is an emerging public health challenge, affecting nearly 30% of adults worldwide and increasing in parallel with the global rise in metabolic risk factors such as obesity, diabetes, and hypertension.1–3 It is projected to become a leading cause of end-stage hepatic disease in the coming decades.4,5 MASLD often begins with simple hepatic steatosis; however, inadequate control of metabolic risk factors can drive its progression to metabolic dysfunction-associated steatohepatitis (MASH), advanced fibrosis, cirrhosis, and hepatocellular carcinoma.6–10 The global prevalence of MASLD is projected to increase dramatically during the next decade, with the fastest growth expected in China, where liver-related mortality and late-stage liver disease mortality are expected to more than double.11,12

MASLD is a complex and heterogeneous disease in which systemic iron homeostasis, normally regulated by the liver-derived hormone hepcidin, is often disrupted.13,14 Hepcidin is a critical ferric homeostasis protein,15 and the regulatory mechanisms of hepcidin expression in MASLD patients have not been extensively investigated.16 Historically, hepatic iron was evaluated by histological staining of iron particles in liver biopsy specimens. Liver biopsy assessment remains central to studying the pathophysiology of iron-related parenchymal injury, inflammation, and fibrosis progression.17 Hyperferritinemia (HFE) is an independent long-term predictor of overall mortality in MASLD, but it is uncertain whether HFE is associated with greater significant fibrosis (SF) in the liver.18,19 The distribution of hepatic iron stores in liver diseases may follow one of three patterns: isolated hepatocellular iron deposition, isolated reticuloendothelial system (RES) deposition, or a mixed pattern involving both hepatocellular and RES deposition.18,20,21 Iron staining in RES is associated with histological features and progression to MASH and occurs only in hepatocytes or in a mixed pattern with milder liver disease.21,22 In Kupffer cells, the predominant non-parenchymal cell type in the liver, iron accumulation triggers the release of pro-inflammatory cytokines that activate hepatic stellate cells and contribute to liver fibrosis.23 Therefore, the formation of hepatic fibrosis is influenced, to some extent, by hepatic iron deposition (HID), and excessive iron deposition may further promote the development of cirrhosis and hepatocellular carcinoma.24 Thus, HID is considered a surrogate marker of hepatic fibrosis in both disease etiology and severity and is not merely a factor of fibrogenesis.25

Previous studies have examined the relationship between HFE mutations and the severity of MASLD and concluded that HFE C282Y hybrid mutations were associated with advanced fibrosis in White individuals with MASH.26 Genome-wide association studies conducted in Europe and Asia have identified many variations in transmembrane protease serine 6 (TMPRSS6) and transferrin (TF)-related genes that vary with iron status.27 It has been reported that 36 single-nucleotide polymorphisms (SNPs) in TF, HFE, and TMPRSS6 genes were associated with iron status.28 Critically, TF itself is a key component of the iron-sensing mechanism that regulates hepcidin. Diferric TF binds to TFR2 on hepatocytes to upregulate hepcidin via the BMP/SMAD pathway. TF variants (such as rs1049296) are postulated to disrupt this process by blunting the hepcidin response to iron, leading to inadequate suppression of iron absorption and potentially promoting HID.29 In a small cohort of Italian patients with MASLD, variants of iron-related gene metabolism, particularly ceruloplasmin variants, were associated with higher serum ferritin levels, increased hepatic iron stores, and more severe liver disease.30

Based on this background of evidence, this cross-sectional study aimed to examine whether TF-rs1049296 modulates the effect of HID distribution pattern on the risk of SF and whether there is an interaction between the HID distribution pattern and the TF-rs1049296 genetic variant, thus influencing the severity of liver disease, in a large cohort of Chinese individuals with biopsy-proven MASLD.

Methods

Patient population

This study involved a well-characterized epidemiological study of MASH (i.e., the “PERSONS” cohort study).31 We initially recruited 892 Han adult individuals with liver biopsy data (from December 2017 to February 2021). Among these individuals, 486 cases were excluded from the statistical analysis. The main reasons for exclusion were as follows: (1) fatty hepatic infiltration < 5% on liver histology; (2) body mass index (BMI) < 23 kg/m2; (3) missing genotype data on the TF-rs1049296 genetic variant; and (4) missing serum ferritin data. Subjects with HFE genotypes at risk of iron overload (hemochromatosis), anemia, inflammation, and beta-thalassemia trait were excluded from the analysis. Due to these exclusions, a total of 406 individuals with biopsy-confirmed MASLD were included in the final analysis. Written informed consent was obtained from all participants. The study was approved by the Institutional Ethics Review Board of the First Affiliated Hospital of Wenzhou Medical University.

Diagnosis of MASLD

The diagnosis of MASLD was based on the presence of hepatic steatosis (≥5% on histology) in combination with one of the following three criteria: (1) overweight or obesity (BMI ≥ 23 kg/m2 for the Asian population), (2) presence of type 2 diabetes, or (3) evidence of metabolic dysregulation.32 Given that our inclusion criteria required a BMI ≥ 23 kg/m2, all participants in our final cohort fulfilled the MASLD diagnostic criteria. It is noteworthy that this patient population also aligns with the newly proposed definition of MASLD, as the core feature of metabolic dysfunction is central to both fatty liver disease nomenclatures.

Clinical and laboratory data

In all participants, we recorded demographics, anthropometric data, clinical parameters, and comorbidities. Biochemical variables were collected from all participants within 24 h of the liver biopsy examination. BMI was calculated as weight (kg) divided by the square of height (m). Insulin resistance was estimated by the homeostasis model assessment (HOMA-IR score).33 Hypertension was defined as blood pressure ≥ 130/85 mmHg or antihypertensive treatment.34 Diabetes was defined by a fasting plasma glucose level ≥ 7.0 mmol/L, hemoglobin A1c ≥ 6.5% (≥48 mmol/mol), or the use of any antihyperglycemic agents.35

Quantification of HID patterns

Hepatic iron particle deposition refers to the accumulation of ferritin and hemosiderin in the hepatocytes and Kupffer cells. The staining principle is that the trivalent iron ion is separated from the protein by dilute hydrochloric acid in a solution of potassium ferricyanide, which reacts with the potassium ferricyanide to produce an insoluble blue compound, the ferricyanide Prussian blue of trivalent iron.36

Significant iron deposition was defined as the presence of discernible hemosiderin granules. Hepatocellular iron was graded on a scale from 0 to 4, following the method established by Nelson et al.21 RES iron, representing iron within sinusoidal lining cells, was scored using a separate three-tiered scale: 0 (absent), 1 (mild), and 2 (more than mild). Based on these scores, the overall iron deposition pattern for each liver biopsy sample was categorized as predominantly hepatocellular iron, predominantly RES iron, or mixed hepatocellular and RES iron (indicating concurrent significant iron deposition in hepatocytes and reticuloendothelial cells).

To ensure diagnostic accuracy and consistency, all Prussian blue-stained slides were reviewed independently by two experienced liver pathologists who were blinded to the clinical and genetic data of participants. Any discrepant cases were re-examined jointly until a consensus was reached.

Histological liver assessment

Liver biopsies were performed using a 16-gauge needle under ultrasound guidance. Liver biopsy specimens were scored by an expert liver pathologist (Y-Y L), who was unaware of the participants’ clinical details. Histologic scoring was based on the MASLD activity score.37 SF was histologically defined by liver fibrosis ≥ F2 stage.38

Analysis of TF-rs1049296 polymorphism

Genotyping for the TF-rs1049296 variant was performed using the MassARRAY (Agena Biosciences, San Diego, CA, USA) or TaqMan assay (Bio-Rad, Hercules, CA, USA) platforms, according to the manufacturer’s protocol. Each sample used approximately 20 ng of genomic DNA extracted from peripheral blood leukocytes for genotyping. Site-specific PCR and primer detections were designed by the corresponding detection design suite v3.1.

Statistical analysis

We used PLINK 1.9 for the QC of genomics data. We removed SNPs with (1) a MAF < 0.01, (2) missing rate > 5%, or (3) deviation from Hardy–Weinberg equilibrium (P-value < 1 × 10−6). We removed individuals with (1) a calling rate < 5%, (2) inconsistent physiological and genetic sex, and (3) those who had pi-hat (i.e., second-degree relatives) > 0.2 with other individuals. We further removed individuals without any information about biopsy-proven or retained iron-related SNPs. Finally, the TF-rs1049296 variant was analyzed in the present analysis.

All data were analyzed with the R statistical package (The R Foundation; http://www.r-project.org ; version 3.4.3) and Empower (R) (www.empowerstats.com ; X&Y Solutions, Inc., Boston, MA, USA). Continuous variables were expressed as means ± standard deviation or medians and interquartile ranges, depending on whether their distribution was normal or skewed, and the one-way ANOVA or the Kruskal–Wallis test was used for comparison. The categorical variables were expressed as proportions and compared using the chi-square test or Fisher’s exact test as appropriate. Iron-related genes (i.e., TF, HFE, TIBC, TM6SF2, TMPRSS6, PNPLA3 genetic variants) were selected28, and TF-rs1049296 was found to be associated with HID and liver fibrosis in genome-wide association studies. Factors associated with SF were assessed using univariable and multivariable logistic regression analyses. The association between different hepatic iron deposit locations and the presence of SF was tested by binary logistic regression analyses. These regression models were adjusted for potential confounders, such as age, BMI, HOMA-IR, and serum ferritin concentrations. Stratified and interaction analyses were also performed to examine the effect of TF-rs1049296 polymorphism on the association between different hepatic iron deposit locations and SF. A P-value < 0.05 was considered statistically significant.

Results

Characteristics of hepatic iron staining patterns

As shown in Figure 1, 406 Chinese individuals with biopsy-confirmed MASLD were included in the final analysis. Significant differences in clinical and laboratory parameters among patients with different iron staining and those without hepatic iron staining are shown in Table 1. Stainable hepatic iron was found in 271 patients (66.7% of total), and three distinct patterns of hepatic iron staining were observed: hepatocellular [45/271 (16.6%)], RES [73/271 (26.9%)], or mixed pattern [153/271 (56.5%)]. Significant differences in staining patterns were found in women with increased BMI in the different HID groups, with the highest BMI values observed in the iron-located RES system group. According to hepatic iron staining patterns, there were also significant differences in total bilirubin, uric acid, HOMA-IR, triglycerides, high-sensitivity C-reactive protein, hemoglobin, serum iron, ferritin, and proportion of hypertension. In addition, there were also significant differences in the proportion of hepatocyte ballooning and fibrosis according to HID locations.

Flowchart for the study.
Fig. 1  Flowchart for the study.

MASLD, metabolic dysfunction-associated steatotic liver disease; BMI, body mass index; TF, transferrin.

Table 1

Comparison of clinical and laboratory parameters according to the hepatic iron deposit location

No iron stains (n = 135)HC iron only (n = 45)RES iron only (n = 73)Mixed HC/RES iron (n = 153)P-value
Clinical parameters
  Female sex, n (%)71 (52.6)3 (6.7)17 (23.3)18 (11.8)0.001
  Age, years43.2 ± 12.838.4 ± 11.842.1 ± 14.042.8 ± 12.40.169
  Body mass index, kg/m227.5 ± 3.227.0 ± 2.928.9± 5.027.1 ± 3.2<bold>0.003
Laboratory parameters
  Alanine aminotransferase, U/L47.0 (26.5–82.5)38.0 (25.0–82.0)54.0 (35.0–101.0)54.0 (32.0–87.0)0.110
  Aspartate aminotransferase, U/L34.0 (23.5–58.0)33.0 (21.0–48.0)39.0 (27.0–71.0)34.0 (25.0–52.0)0.052
  Gamma-glutamyltransferase, U/L49.0 (27.5–84.5)53.0 (35.0–105.0)52.0 (36.0–107.0)54.0 (36.0–75.0)0.535
  Total bilirubin, µmol/L11.0 (8.0–14.5)12.0 (9.0–14.0)13.0 (9.0–16.0)13.0 (10.0–18.0)<bold>0.002
  Uric acid, µmol/L358.0 (305.0–433.0)407.0 (364.0–474.0)393.0 (330.0–477.0)394.0 (335.0–477.0)<bold>0.004
  Fasting glucose, mmol/L6.3 ± 1.85.6 ± 1.36.4 ± 3.06.0 ± 1.80.069
  Fasting insulin, pmol/L111.1 (69.7–171.6)82.7 (62.3–142.9)117.5 (87.6–165.4)105.2 (68.6–152.1)0.063
  HOMA-IR score4.0 (2.7–5.9)2.7 (2.1–4.7)4.5 (3.1–6.5)3.8 (2.3–5.2)<bold>0.012
  Total cholesterol, mmol/L5.1 ± 1.35.2 ± 1.25.4± 1.25.1 ± 1.20.301
  Triglycerides, mmol/L1.8 (1.2–2.6)2.2 (1.6–2.9)1.9 (1.5–2.9)2.1 (1.4–3.2)<bold>0.044
  HDL-cholesterol, mmol/L1.1 ± 0.41.0 ± 0.21.0 ± 0.21.0 ± 0.20.080
  LDL-cholesterol, mmol/L3.0 (2.4–3.6)2.9 (2.5–3.6)3.1 (2.6–3.7)2.8 (2.3–3.4)0.060
  Platelet count, ×109/L252.6 ± 59.0264.6 ± 55.0245.5 ± 54.7239.5 ± 64.80.470
  High-sensitivity C-reactive protein*, mg/L1.6 (0.8–3.6)1.8 (1.2–2.9)1.2 (0.5–5.5)1.1 (0.6–1.5)<bold>0.034
  Hemoglobin, g/L140.9 ± 15.8152.1 ± 11.4149.2 ± 15.5150.8 ± 12.80.001
  Iron, µmol/L15.3 (11.7–18.7)16.0 (13.3–18.2)15.5 (13.6–20.2)18.4 (13.9–23.3)<bold>0.017
  Transferrin concentrations**, %23.5 (18.3–31.0)30.50 (23.0–32.5)27.50 (23.3–32.5)33.00 (25.5–41.5)0.637
  Ferritin, mcg/L142.5 (69.0–250.6)281.2 (191.4–402.5)291.3 (168.9–407.8)419.3 (281.6–594.9)0.001
Comorbid diseases
  Type 2 diabetes, n (%)60 (44.4)10 (22. 2)30 (41.1)58 (37.9)0.065
  Hypertension, n (%)64 (47.4)11 (24.4)41 (56.2)66 (43.1)<bold>0.008
  Dyslipidemia, n (%)119 (88.8)42 (93.3)70 (95.9)135 (89.4)0.307
Histological liver features
  Steatosis, n (%)0.374
    Mild steatosis59 (41.3)23 (51.1)27 (37.0)73 (47.7)
    Severe steatosis76 (56.3)22 (48.9)46 (63.0)80 (52.3)
  Hepatocyte ballooning, n (%)<bold>0.002
    Mild ballooning73 (54.1)33 (73.3)32 (43.8)100 (65.4)
    Severe ballooning62 (45.9)15 (26.7)41 (56.2)53 (34.6)
  Lobular inflammation, n (%)0.487
    Mild inflammation81 (60.0)30 (66.7)40 (54.8)98 (64.1)
    Severe inflammation54 (40.0)15 (33.3)33 (45.2)55 (35.9)
  Fibrosis stage, n (%)<bold>0.029
    No-significant fibrosis106 (78.5)40 (88.9)48 (65.8)119 (77.8)
    Significant fibrosis29 (21.5)5 (11.1)25 (34.2)34 (22.2)

Effect of iron-related genes and HID location on liver fibrosis severity

Interaction tests for each SNP were based on independent biological hypotheses regarding their respective roles in iron metabolism. Therefore, each test was interpreted individually, and no correction for multiple comparisons was applied, consistent with the analysis of pre-specified candidate genes. According to the interaction analyses shown in Table 2, iron-related genes (SLC40A1 of chromosome 2, SPPRB of chromosome 3, HFE of chromosome 6, TIBC of chromosome 18, TM6SF2 of chromosome 19, TMPRSS6 and PNPLA3 of chromosome 22) and HID location did not show any significant interaction effect on the severity of hepatic fibrosis. Only TF-rs1049296 in chromosome 3 had a significant interaction with HID and hepatic fibrosis (Pinteraction = 0.035).

Table 2

Effects of iron-related genes and locations of hepatic iron deposition on the severity of liver fibrosis

LocusGeneLocation of hepatic iron deposition
P-value (interaction)
HC iron onlyRES iron onlyMixed HC/RES iron
CHR 2
  rs994227 T > CSLC40A10.52 (0.19–1.47)2.04 (1.06–3.96)0.94 (0.52–1.71)0.483
CHR 3
  rs1830084 A > TTF0.51 (0.11–2.46)1.21 (0.46–3.18)1.11 (0.56–2.64)0.562
  rs1799852 C > TTF0.46 (0.92–2.34)1.63 (0.58–4.55)0.96 (0.37–2.49)0.995
  rs2280673 A > CTF0.20 (0.24–1.66)1.44 (0.51–4.04)0.63 (0.25–1.59)0.814
  rs3811647 G > ATF0.56 (0.11–2.89)2.74 (1.07–6.99)1.08 (0.45–2.59)0.625
  rs1880669 T > CTF0.43 (0.05–3.92)5.00 (1.62–15.44)1.43 (0.49–4.16)0.307
  rs1358024 C > TTF0.64 (0.12–3.27)3.42 (1.35–8.68)1.48 (0.62–3.52)0.432
  rs1525892 G > ATF0.56 (0.11–2.89)2.74 (1.07–6.99)1.08 (0.45–2.59)0.625
  rs3811658 C > TTF0.55 (0.11–2.82)2.82 (1.10–7.26)1.10 (0.46–2.65)0.757
  rs8177248 C > TTF0.55 (0.11–2.82)2.82 (1.10–7.26)1.10 (0.46–2.65)0.729
  rs7638018 A > GTF0.56 (0.11–2.89)2.60 (1.02–6.59)1.08 (0.45–2.59)0.591
  rs1049296 C > GTF0.89(0.11–6.98)6.83(1.78–26.14)1.71(0.55–5.27)<bold>0.035
CHR 6
  rs1799945 C > GHFE0.47 (0.17–1.31)1.62 (0.85–3.07)0.94 (0.53–1.67)0.973
CHR 18
  rs9948708 G > ATIBC0.67 (0.17–2.64)1.33 (0.48–3.70)0.84 (0.35–2.00)0.979
CHR 19
  rs58542926 C > TTM6SF20.55 (0.20–1.56)1.62 (0.81–3.26)0.87 (0.46–1.62)0.950
CHR 22
  rs855791 A > GTMPRSS60.34 (0.04–2.93)0.74 (0.21–2.66)1.13 (0.38–3.37)0.530
  rs4820268 G > ATMPRSS60.30 (0.03–2.68)0.68 (0.21–2.26)0.68 (0.22–2.11)0.572
  rs1421312 A > GTMPRSS60.26 (0.03–2.19)1.56 (0.55–4.49)0.93 (0.35–2.48)0.801
  rs2111833 C > TTMPRSS60.27 (0.03–2.24)1.31 (0.50–3.46)0.83 (0.32–2.12)0.674
  rs738409 C > GPNPLA31.17 (0.19–7.07)1.54 (0.31–7.69)1.38 (0.36–5.31)0.495

Characteristics of participants stratified by TF-rs1049296 polymorphism genotypes

Table 3 summarizes the baseline characteristics of the study participants, stratified by the TF-rs1049296 polymorphism genotypes. The distribution of TF-rs1049296 genotypes was as follows: 204 (50.2%) had the CC genotype, and 202 (49.8%) had the (CT+TT) genotype. This genotype distribution did not deviate from the Hardy–Weinberg equilibrium. The distribution of main clinical variables, laboratory parameters, comorbid diseases, and histological liver features by TF-rs1049296 polymorphism genotypes is shown in Table 3.

Table 3

Characteristics of study participants, stratified by TF-rs1049296 polymorphism

C/C (n = 204)C/T +T/T (n = 202)P-value
Clinical parameters
  Female sex, n (%)59 (28.9)50 (24.8)0.343
  Age, years43.8 ± 13.240.9 ± 12.3<bold>0.024
  Body mass index, kg/m227.4 ± 2.927.7 ± 4.20.822
Laboratory parameters
  Alanine aminotransferase, U/L48.0 (27.0–83.0)53.5 (30.0–94.0)0.341
  Aspartate aminotransferase, U/L35.0 (25.0–57.0)34.0 (24.0–56.0)0.518
  Gamma-glutamyl transferase, U/L53.0 (31.0–84.2)53.0 (35.0–86.8)0.554
  Total bilirubin, µmol/L12.0 (9.0–16.0)12.0 (9.0–16.0)0.982
  Uric acid, µmol/L375.5 (313.8–446.0)393.0 (332.0–474.0)0.063
  Fasting glucose, mmol/L6.0 ± 1.86.2 ± 2.20.737
  Fasting insulin, pmol/L106.7 (69.2–148.2)109.0 (73.1–161.0)0.361
  HOMA-IR score3.8 (2.3–5.4)3.9 (2.5–6.0)0.241
  Total cholesterol, mmol/L5.1 ± 1.35.2 ± 1.20.451
  Triglycerides, mmol/L2.0 (1.3–2.8)2.0 (1.5–3.0)0.379
  HDL-cholesterol, mmol/L1.0 ± 0.31.0 ± 0.20.121
  LDL-cholesterol, mmol/L2.9 (2.3–3.6)3.0 (2.4–3.6)0.564
  Platelet count, ×109/L234.7 ± 58.0253.6 ± 66.1<bold>0.009
  High-sensitivity C-reactive protein*, mg/L1.2 (0.6–2.2)1.3 (0.7–2.9)0.147
  Hemoglobin, g/L146.7 ± 14.7148.0 ± 15.10.307
  Iron, µmol/L16.70 (13.40–21.90)17.0 (12.9–19.9)0.323
  Transferrin concentrations**, %29.0 (22.5–38.5)29.0 (22.0–34.8)0.445
  Ferritin, mcg/L301.4 (151.1–440.0)272.4 (148.2–440.5)0.298
Comorbid diseases
  Type 2 diabetes, n (%)83 (40.7)75 (37.1)0.462
  Hypertension, n (%)89 (43.6)93 (46.0)0.625
  Dyslipidemia, n (%)183 (90.1)183 (91.5)0.638
Histological liver features
  Steatosis, n (%)0.757
    Mild steatosis93 (45.6)89 (44.1)
    Severe steatosis111 (54.4)113 (55.9)
  Hepatocyte ballooning, n (%)0.627
    Mild ballooning122 (59.8)116 (57.4)
    Severe ballooning82 (40.2)86 (42.6)
  Lobular inflammation, n (%)0.556
    Mild inflammation128 (62.7)121 (59.9)
    Severe inflammation76 (37.3)81 (40.1)
  Fibrosis stage, n (%)0.176
    No-significant fibrosis163 (79.9)150 (74.3)
    Significant fibrosis41 (20.1)52 (25.7)

Multivariable regression analysis of factors associated with SF

Multivariable logistic regression analysis was performed to identify independent factors associated with SF, as shown in Table 4. In univariable regression analysis, male sex, higher BMI, increased serum liver enzymes (alanine aminotransferase, aspartate aminotransferase), insulin resistance (HOMA-IR, fasting insulin), type 2 diabetes, and hypertension, as well as severe histological features (steatosis, ballooning, and inflammation), and the presence of RES iron deposition were significantly associated with SF. However, in a multivariable regression model adjusted for potential confounding factors, only male sex (adjusted odds ratio (OR) 0.28, 95% confidence interval (CI) 0.13–0.60, p = 0.001), hypertension (adjusted OR 1.90, 95% CI 1.05–3.45, p = 0.035), and severe lobular inflammation (adjusted OR 8.40, 95% CI 4.29–16.44, p < 0.001) were independently associated with SF. Conversely, the TF-rs1049296 genotype was not independently associated with SF.

Table 4

Univariable and multivariable logistic regression analysis of factors associated with fibrosis stage

Univariable analysisP-valueMultivariable analysisP-value
Clinical parameters
  Sex<bold>0.002<bold>0.001
    Female1.01.0
    Male0.45 (0.28, 0.74)0.28 (0.13, 0.60)
  Age, years1.01 (1.00, 1.03)0.149
  Body mass index, kg/m21.12 (1.05, 1.19)0.001
Laboratory parameters
  Alanine aminotransferase, U/L1.01 (1.00, 1.01)0.001
  Aspartate aminotransferase, U/L1.02 (1.01, 1.02)0.001
  Gamma-glutamyl transferase, U/L1.00 (0.99,1.01)0.072
  Total bilirubin, µmol/L1.15 (0.95, 1.38)0.492
  Uric acid, µmol/L1.00 (0.99,1.00)0.890
  Fasting glucose, mmol/L1.00 (1.00, 1.01)0.060
  Fasting insulin, pmol/L1.16 (1.04, 1.29)<bold>0.006
  HOMA-IR score1.03 (1.00, 1.05)<bold>0.039
  Total cholesterol, mmol/L1.15 (0.95, 1.38)0.155
  Triglycerides, mmol/L0.96 (0.84, 1.10)0.547
  HDL-cholesterol, mmol/L1.73 (0.80, 3.75)0.165
  LDL-cholesterol, mmol/L1.08 (0.84, 1.38)0.558
  Platelet count, ×109/L0.99 (0.99, 1.00)0.516
  High-sensitivity C-reactive protein*, mg/L1.03 (0.97, 1.08)0.332
  Hemoglobin, g/L1.00 (0.98, 1.01)0.566
  Iron, µmol/L1.03 (0.97, 1.09)0.361
  Transferrin concentrations**1.01 (0.98, 1.05)0.447
  Ferritin, mcg/L1.00 (0.99, 1.00)0.172
Comorbid diseases
  Type 2 diabetes<bold>0.005
1.0
1.97 (1.23, 3.14)
  Hypertension0.001<bold>0.035
1.01.0
2.25 (1.40, 3.60)1.90 (1.05, 3.45)
  Dyslipidemia0.524
1.0
0.78 (0.36, 1.68)
Histological liver features
  Steatosis0.001
    Mild steatosis1.0
    Severe steatosis3.14 (1.87, 5.29)
  Hepatocyte ballooning0.001
    Mild ballooning1.0
    Severe ballooning3.25 (2.01, 5.26)
  Lobular inflammation0.0010.001
    Mild inflammation1.01.0
    Severe inflammation9.95 (5.72, 17.32)8.40 (4.29, 16.44)
Distribution of iron deposition<bold>0.035
  No iron stains1.01.0
  HC iron only0.46 (0.17, 1.26)0.131
  RES iron only1.90 (1.01, 3.59)<bold>0.0472.31 (0.98, 5.43)<bold>0.054
  Mixed HC/RES iron1.04 (0.60, 1.83)0.8792.53 (1.18, 5.43)<bold>0.017
TF rs1049296
  Dominant model0.177
    C/C1.0
    T/T+C/T1.38 (0.87, 2.20)

TF-rs1049296 variant influences the association between different HID localizations and SF

Multivariable logistic regression modeling was undertaken to better understand the association between the TF-rs1049296 variant and SF in patients with different HID localizations. As shown in Table 5, the rs1049296 T/T + C/T genotypes were associated with an increased risk of SF, with an OR of 6.65 (T/T + C/T vs. C/C, 95% CI 1.84–23.97, p < 0.05) for the dominant model after adjusting for age, BMI, hemoglobin, HOMA-IR, and serum ferritin concentrations. This association was especially evident in men with isolated RES iron, where the T allele conferred an adjusted OR of 5.26 (95% CI 1.21–22.81, p < 0.05) for SF. Conversely, in this model, the TF-rs1049296 variant was not associated with SF in the context of other iron deposition patterns (no iron, hepatocellular iron only, or mixed hepatocellular/RES iron), highlighting the specificity of the gene–environment interaction between the T allele and RES iron in driving liver fibrosis progression.

Table 5

Association between TF-rs1049296 genotype and liver fibrosis, stratified by sex and hepatic iron deposition

StratificationIron DepositionGenotypeUnadjustedAdjusted
TotalNo iron stainT/T+C/T0.75 (0.33, 1.72)0.95 (0.37, 2.48)
HC iron onlyT/T+C/T0.67 (0.10, 4.43)1.39 (0.10, 19.77)
RES iron onlyT/T+C/T5.14 (1.78, 14.84)*6.65 (1.84, 23.97)*
Mixed HC/REST/T+C/T1.29 (0.60, 2.77)1.16 (0.50, 2.70)
FemaleNo iron stainT/T+C/T1.32 (0.47, 3.72)2.74 (0.69, 10.80)
HC iron onlyT/T+C/T//
RES iron onlyT/T+C/T//
Mixed HC/REST/T+C/T0.60 (0.09, 3.99)1.59 (0.12, 20.56)
MaleNo iron stainT/T+C/T0.33 (0.08, 1.47)0.26 (0.05, 1.36)
HC iron onlyT/T+C/T0.33 (0.03, 3.50)0.86 (0.03, 25.98)
RES iron onlyT/T+C/T4.29 (1.25, 14.68)*5.26 (1.21, 22.81)*
Mixed HC/REST/T+C/T1.63 (0.68, 3.91)1.47 (0.56, 3.85)

Discussion

In this cross-sectional study of Chinese individuals with biopsy-proven MASLD, we showed a novel gene-environment interaction driving liver fibrosis progression, i.e., the synergy between the TF-rs1049296 T allele and RES iron deposition. To our knowledge, this specific gene-environment interaction has not been previously reported and provides a possible mechanistic link between genetic predisposition in systemic iron transport and localized iron-driven inflammation in hepatic macrophages.

Although it is known that tissue iron excess can damage the liver by inducing oxidative stress and lipid peroxidation,21,39,40 the effects of hepatic iron accumulation on hepatic fibrogenesis are not fully understood. In recent years, it has been appreciated that the genetic background plays an important role in the development and progression of MASLD. Patients with MASLD tend to accumulate iron in the hepatocytes and macrophages, possibly due to various factors (genetics, hepatic inflammation, and leakage of dead hepatocytes with subsequent phagocytosis by hepatic macrophages).41

Liver fibrosis has been identified as a meaningful prognostic factor in individuals with MASLD.42 Previously, we have reported the presence of hepatic iron stores in the RES in over 10% of patients with MASLD,21 which disrupts the balance between M1/M2 macrophage polarization, thus leading to macrophage-driven hepatic inflammation and fibrosis in MASLD.43

The TF-rs1049296 variant, also known as Pro570Ser, is known to be the basis for the C1/C2 subtypes of the TF gene. The rs1049296 (C) allele encodes the C1 subtype, while the rarer rs1049296 (T) allele encodes the C2 subtype. We propose a mechanistic link whereby the T allele (C2 subtype), associated with systemic iron overload and increased iron flux to the liver, exacerbates iron accumulation within RES macrophages (Kupffer cells). In the inflammatory milieu of MASLD, the iron overload increases oxidative stress through the Fenton reaction, driving Kupffer cells toward a profibrotic phenotype and the release of mediators (e.g., transforming growth factor-β) that directly promote hepatic fibrogenesis.44 This gene-environment interaction postulates that the TF-rs1049296 T allele increases the iron burden presented to the liver, while RES iron deposition reflects an inflammatory microenvironment that primes macrophages for iron-driven activation. The convergence of these factors creates a synergistic effect, profoundly exacerbating iron-mediated oxidative stress and profibrotic signaling. The plausibility of this model is supported by functional evidence demonstrating that the TF receptor 2 variant synergizes with other iron-loading mutations, amplifying pathological iron overload and associated end-organ damage.45

The major strengths of our study are as follows: first, it is the first study to examine a cohort of Asian individuals with hepatic iron in MASLD; second, liver biopsy specimens were rigorously analyzed using widely validated criteria, with assessments reviewed by a panel of expert liver pathologists and final confirmation by a single senior pathologist, ensuring both accuracy and consistency in histological evaluation.

This study also has several limitations that should be considered when interpreting the results. First, the cross-sectional design of our study precludes the establishment of causal relationships between the observed genetic factors, iron deposition, and severity of liver fibrosis. Second, the lack of detailed dietary iron intake data limits our ability to delineate the contribution of dietary sources versus inherent metabolic dysregulation to hepatic iron overload. Finally, our study cohort consisted of individuals of Asian descent; therefore, the generalizability of our findings to other ethnic populations requires further validation, as genetic backgrounds and environmental exposures can differ significantly.

Conclusions

In this large cross-sectional study, we identified a novel iron-related genetic susceptibility gene (i.e., the TF-rs1049296 variant) for MASLD. The T allele is significantly associated with a higher risk of SF in the RES pattern, and the interaction between genotype and different HID locations may increase the risk of SF. Further studies are needed to confirm these findings in other independent cohorts of patients with MASLD from different countries.

Declarations

Ethical statement

The study was conducted in accordance with the Helsinki Declaration as revised in 2024 and approved by the Institutional Ethics Review Board of the First Affiliated Hospital of Wenzhou Medical University (No. KY2016-246). Written informed consent was obtained from all participants.

Data sharing statement

The data supporting the findings of this study are available from the corresponding author (zhengmh@wmu.edu.cn) upon reasonable request. Access to specific data may require approval from the corresponding author and compliance with relevant ethical guidelines.

Funding

This work was funded by grants from the National Natural Science Foundation of China (82070588), High-Level Creative Talents from the Department of Public Health in Zhejiang Province (S2032102600032), and the Project of New Century 551 Talent Nurturing in Wenzhou. GT is supported in part by grants from the School of Medicine, University of Verona, Verona, Italy. CDB is supported in part by the Southampton NIHR Biomedical Research Centre (NIHR203319), UK. CDB has received research grant support from Echosens, the manufacturer of the Fibroscan device used to assess liver fat and fibrosis in chronic liver diseases.

Conflict of interest

MHZ has been an Associate Editor of Journal of Clinical and Translational Hepatology since 2013, GT has been an Editorial Board Member of Journal of Clinical and Translational Hepatology since 2018. The other authors have no conflict of interests related to this publication.

Authors’ contributions

Conceptualization (SDC, MHZ), data curation (SDC, KTH, HZ, YYL, YJ, HYY, PWZ), methodology (SDC), writing-original draft (SDC), investigation (KTH, HZ, YJ, HYY, PWZ, JML, GT, CDB, MHZ), clinical data management & entry (KTH), pathology sectioning & reading (YYL), writing-review & editing (JML, GT, CDB, MHZ), and project administration (MHZ). All authors contributed to the manuscript for important intellectual content and approved the final submission of the manuscript.

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Cite this article
Chen SD, Huang KT, Zhang H, Li YY, Jin Y, Yuan HY, et al. TF-rs1049296 C>T Variant Modifies the Association between Hepatic Iron Stores and Liver Fibrosis in Metabolic Dysfunction-associated Steatotic Liver Disease. J Clin Transl Hepatol. Published online: Dec 11, 2025. doi: 10.14218/JCTH.2025.00305.
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Article History
Received Revised Accepted Published
June 24, 2025 November 8, 2025 November 20, 2025 December 11, 2025
DOI http://dx.doi.org/10.14218/JCTH.2025.00305
  • Journal of Clinical and Translational Hepatology
  • pISSN 2225-0719
  • eISSN 2310-8819
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TF-rs1049296 C>T Variant Modifies the Association between Hepatic Iron Stores and Liver Fibrosis in Metabolic Dysfunction-associated Steatotic Liver Disease

Sui-Dan Chen, Ka-Te Huang, Huai Zhang, Yang-Yang Li, Yi Jin, Hai-Yang Yuan, Pei-Wu Zhu, Jian-Min Li, Christopher D. Byrne, Giovanni Targher, Ming-Hua Zheng
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